CDS

Accession Number TCMCG029C30258
gbkey CDS
Protein Id XP_023733220.1
Location join(172798..172974,173088..173358,173436..173811,177389..177607,177761..177899,178009..178257,178490..178786)
Gene LOC111881062
GeneID 111881062
Organism Lactuca sativa

Protein

Length 575aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA432228
db_source XM_023877452.1
Definition germacrene A synthase short form-like [Lactuca sativa]

EGGNOG-MAPPER Annotation

COG_category S
Description synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R06523        [VIEW IN KEGG]
R07648        [VIEW IN KEGG]
R08373        [VIEW IN KEGG]
R08541        [VIEW IN KEGG]
R09614        [VIEW IN KEGG]
R09620        [VIEW IN KEGG]
R10598        [VIEW IN KEGG]
R10599        [VIEW IN KEGG]
KEGG_rclass RC01547        [VIEW IN KEGG]
RC02179        [VIEW IN KEGG]
RC02180        [VIEW IN KEGG]
RC02425        [VIEW IN KEGG]
RC02581        [VIEW IN KEGG]
RC02777        [VIEW IN KEGG]
RC03207        [VIEW IN KEGG]
RC03208        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K14182        [VIEW IN KEGG]
ko:K14184        [VIEW IN KEGG]
ko:K15795        [VIEW IN KEGG]
ko:K15799        [VIEW IN KEGG]
ko:K15803        [VIEW IN KEGG]
ko:K18117        [VIEW IN KEGG]
EC 4.2.3.104        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.3.21        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.3.40        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.3.57        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.3.69        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.3.75        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.3.78        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.3.79        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.3.88        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00909        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00909        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005777        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006714        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008300        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009395        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009611        [VIEW IN EMBL-EBI]
GO:0009975        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010333        [VIEW IN EMBL-EBI]
GO:0010334        [VIEW IN EMBL-EBI]
GO:0016042        [VIEW IN EMBL-EBI]
GO:0016106        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016115        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016838        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0042214        [VIEW IN EMBL-EBI]
GO:0042579        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044242        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045338        [VIEW IN EMBL-EBI]
GO:0045339        [VIEW IN EMBL-EBI]
GO:0046246        [VIEW IN EMBL-EBI]
GO:0046434        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051761        [VIEW IN EMBL-EBI]
GO:0051762        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080016        [VIEW IN EMBL-EBI]
GO:0080017        [VIEW IN EMBL-EBI]
GO:0080027        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATCCATACATCTTTAACCAAAACTACATCAAAACCTTCAAGAATGGCCCAAAATGAATCTAATACTACCCTAAAAGAAAACAACCAAACCAACACAGATCCAGTTCGTCCTTTTGCCAACTTCCCTCCGCCTATCTGGGATGATCATTTATTGTCGTTAACTGTTGACTATTTGGAGTTGGAAGCATATGCTAAAGCCATTGACGAGCGAAAAGAAGAGCTGAGAAGATTGATAATTAATCCAAACATCGATTCAAATGCGAAATTATGTTTGATCAATTCTGTATACCGTCTTGGCTTGAGGTATATGTTCGCGGAAGAGATTGAATATCAACTTGACAAACTTTTCAAGGAGTTGAACATGGAAGATTATGATCAAGCTGATCTTTATACGACTTCAATCAACTTCCAAGTTTTCAGACAACATGGTTATAAGTTGTCTTGTGATGTGTTTAAGAAGTTCAAAGACTATAACTCAGGTAAATTCAAGGAATATATTACAGATGATGTAAGGGGCATGTTAAGTTTTTATGAATCTACACAACTGAGAATCAGAGGAGAATCTATTTTAGATGAAGCCTTCGTCTTCATAGAAGCTCAACTTGTAGATTTGGTAGATACTCTTGAAGGTAATCTTGCACGGCAGGTGAGACAGGCGTTGAGGAGCCCTTCACATCGAGGGATGCATATAGTAGAAGCAAGGCTATATTTTTCGAACTATGAAGAAGAATGTTCTACATATGAGTCACTATCAAATCTTGCAAATACACACTTCAACTACCTGCAGCAACTACACAGAGAAGAACTATGCATTTTCACAAAATGGATCAAGGACATGAAGTTTCAAACTATAACTCCTTTTGTAAGAGACAGAACGCCAGAACTCTATTTATGGGCAATCGGTATAATTCCCGAGCCTCATTACTCTCATTCTAGAATCATACTAGCAAAAATGGCACAACTAGTATTGGTGTTAGATGACATATATGATGCATATGGTACTATTGAGGAACTTCGACTTCTAACGGGTGCCATAAACAGTTGGGAAATTAATGCTATGGAACAACTTCCGGAGTATATTAAACCATTTTACAACATTCTCTTGAACGAGCTTACTGAAGTTGAAAAACAACTATCTAGAGAGGGAAGAGCAAACAGGGTTTATGCTACAAAACAAGCATTTCAAAAACTAGCCGGAGGTTACCTACAAGAGGCTGAGTGGAGATGCCAAAGACACGTGCCATCATTTGAAGAATATTTGAAGAATGGATTAATTACTTCTGCCTACGATGTTTTTATATACTCTCCTTTAATGTTTATGGGAGATATTTTCAGTAAAGAGGCTTTGGCTTGGTATGAGAGTCGTCCAAATATTGGGGAAGCTACAATGTCACTTGGAAGACTTTATAATGATGTTACGAGTTTCCAGTTTGAGGGTGAAAGAGCACAACAAGTCGAATCAGTACATACATATATGAAGACTTTCGGGGTACCAGAAAATGTAGCTGTTCAAGAACTCAAGAAAATGATTGAAAATGACTGGAAAGATATAAACGAGGGTTGTCTTAAGCCAACCGAAGTGTCAATGGAACTTCTTGCACCCATTCTTAATTTTGCTAGAATGAATGATATGGTATATAGGTACAGTGACACTTTCACTTTTCCAGAAACAACGATTGTGGAGTATGTTAATCTGTTATTCATAGATTTTGTTCCAAAATATTAA
Protein:  
MIHTSLTKTTSKPSRMAQNESNTTLKENNQTNTDPVRPFANFPPPIWDDHLLSLTVDYLELEAYAKAIDERKEELRRLIINPNIDSNAKLCLINSVYRLGLRYMFAEEIEYQLDKLFKELNMEDYDQADLYTTSINFQVFRQHGYKLSCDVFKKFKDYNSGKFKEYITDDVRGMLSFYESTQLRIRGESILDEAFVFIEAQLVDLVDTLEGNLARQVRQALRSPSHRGMHIVEARLYFSNYEEECSTYESLSNLANTHFNYLQQLHREELCIFTKWIKDMKFQTITPFVRDRTPELYLWAIGIIPEPHYSHSRIILAKMAQLVLVLDDIYDAYGTIEELRLLTGAINSWEINAMEQLPEYIKPFYNILLNELTEVEKQLSREGRANRVYATKQAFQKLAGGYLQEAEWRCQRHVPSFEEYLKNGLITSAYDVFIYSPLMFMGDIFSKEALAWYESRPNIGEATMSLGRLYNDVTSFQFEGERAQQVESVHTYMKTFGVPENVAVQELKKMIENDWKDINEGCLKPTEVSMELLAPILNFARMNDMVYRYSDTFTFPETTIVEYVNLLFIDFVPKY